357 research outputs found
The mechanism of thickness selection in the Sadler-Gilmer model of polymer crystallization
Recent work on the mechanism of polymer crystallization has led to a proposal
for the mechanism of thickness selection which differs from those proposed by
the surface nucleation theory of Lauritzen and Hoffman and the entropic barrier
model of Sadler and Gilmer. This has motivated us to reexamine the model used
by Sadler and Gilmer. We again find a fixed-point attractor which describes the
dynamical convergence of the crystal thickness to a value just larger than the
minimum stable thickness, l_min. This convergence arises from the combined
effect of two constraints on the length of stems in a layer: it is unfavourable
for a stem to be shorter than l_min and for a stem to overhang the edge of the
previous layer. The relationship between this new mechanism and the explanation
given by Sadler and Gilmer in terms of an entropic barrier is discussed. We
also examine the behaviour of the Sadler-Gilmer model when an energetic
contribution from chain folds is included.Comment: 15 pages, 13 figures, revte
Comment on ``Quasisaddles as relevant points of the potential energy surface in the dynamics of supercooled liquids'' [J. Chem. Phys. 116, 10297 (2002); cond-mat/0203301]
Recently, the properties of supercooled liquids have been studied by mapping
instaneous configurations onto minima of the gradient squared. It was
originally suggested that this mapping would probe higher-order saddle points
of the potential energy surface. However, it was subsequently shown that the
majority of the minima of this function are only local minima and so do not
correspond to saddles. In this comment, we provide a critique of the suggestion
made by Angelani et al. [J. Chem. Phys. 116, 10297 (2002); cond-mat/0203301]
that although these minima are not true saddles, they are almost saddles (hence
the term quasisaddles). This issue has important implications for the
interpretation of the results obtained by this approach.Comment: 2 page
New Tetrahedral Global Minimum for the 98-atom Lennard-Jones Cluster
A new atomic cluster structure corresponding to the global minimum of the
98-atom Lennard-Jones cluster has been found using a variant of the
basin-hopping global optimization algorithm. The new structure has an unusual
tetrahedral symmetry with an energy of -543.665361, which is 0.022404 lower
than the previous putative global minimum. The new LJ_98 structure is of
particular interest because its tetrahedral symmetry establishes it as one of
only three types of exceptions to the general pattern of icosahedral structural
motifs for optimal LJ microclusters. Similar to the other exceptions the global
minimum is difficult to find because it is at the bottom of a narrow funnel
which only becomes thermodynamically most stable at low temperature.Comment: 3 pages, 2 figures, revte
Melting of aluminium clusters
The melting of Al clusters in the size range 49 <= N <= 62 has been studied
using two model interatomic potentials. The results for the two models are
significantly different. The glue potential exhibits a smooth relatively
featureless heat capacity curve for all sizes except for N = 54 and N = 55,
sizes at which icosahedral structures are favoured over the polytetrahedral.
Gupta heat capacity curves, instead, show a well-defined peak that is
indicative of a first-order-like transition. The differences between the two
models reflect the different ground-state structures, and neither potential is
able to reproduce or explain the size dependence of the melting transition
recently observed in experiments
Power-law distributions for the areas of the basins of attraction on a potential energy landscape
Energy landscape approaches have become increasingly popular for analysing a
wide variety of chemical physics phenomena. Basic to many of these applications
has been the inherent structure mapping, which divides up the potential energy
landscape into basins of attraction surrounding the minima. Here, we probe the
nature of this division by introducing a method to compute the basin area
distribution and applying it to some archetypal supercooled liquids. We find
that this probability distribution is a power law over a large number of
decades with the lower-energy minima having larger basins of attraction.
Interestingly, the exponent for this power law is approximately the same as
that for a high-dimensional Apollonian packing, providing further support for
the suggestion that there is a strong analogy between the way the energy
landscape is divided into basins, and the way that space is packed in
self-similar, space-filling hypersphere packings, such as the Apollonian
packing. These results suggest that the basins of attraction provide a
fractal-like tiling of the energy landscape, and that a scale-free pattern of
connections between the minima is a general property of energy landscapes.Comment: 4 pages, 3 figure
Structural relaxation in Morse clusters: Energy landscapes
We perform a comprehensive survey of the potential energy landscapes of
13-atom Morse clusters, and describe how they can be characterized and
visualized. Our aim is to detail how the global features of the funnel-like
surface change with the range of the potential, and to relate these changes to
the dynamics of structural relaxation. We find that the landscape becomes
rougher and less steep as the range of the potential decreases, and that
relaxation paths to the global minimum become more complicated.Comment: 21 pages, 3 tables, 5 figure
Kinetic Monte Carlo simulations of the growth of polymer crystals
Based upon kinetic Monte Carlo simulations of crystallization in a simple
polymer model we present a new picture of the mechanism by which the thickness
of lamellar polymer crystals is constrained to a value close to the minimum
thermodynamically stable thickness, l_{min}. The free energetic costs of the
polymer extending beyond the edges of the previous crystalline layer and of a
stem being shorter than l_{min} provide upper and lower constraints on the
length of stems in a new layer. Their combined effect is to cause the crystal
thickness to converge dynamically to a value close to l_{min} where growth with
constant thickness then occurs. This description contrasts with those given by
the two dominant theoretical approaches. However, at small supercoolings the
rounding of the crystal profile does inhibit growth as suggested in Sadler and
Gilmer's entropic barrier model.Comment: 12 pages, 13 figures, revte
Structural Transitions and Global Minima of Sodium Chloride Clusters
In recent experiments on sodium chloride clusters structural transitions
between nanocrystals with different cuboidal shapes were detected. Here we
determine reaction pathways between the low energy isomers of one of these
clusters, (NaCl)35Cl-. The key process in these structural transitions is a
highly cooperative rearrangement in which two parts of the nanocrystal slip
past one another on a {110} plane in a direction. In this way the
nanocrystals can plastically deform, in contrast to the brittle behaviour of
bulk sodium chloride crystals at the same temperatures; the nanocrystals have
mechanical properties which are a unique feature of their finite size. We also
report and compare the global potential energy minima for (NaCl)NCl- using two
empirical potentials, and comment on the effect of polarization.Comment: extended version, 13 pages, 8 figures, revte
Coordination motifs and large-scale structural organization in atomic clusters
The structure of nanoclusters is complex to describe due to their
noncrystallinity, even though bonding and packing constraints limit the local
atomic arrangements to only a few types. A computational scheme is presented to
extract coordination motifs from sample atomic configurations. The method is
based on a clustering analysis of multipole moments for atoms in the first
coodination shell. Its power to capture large-scale structural properties is
demonstrated by scanning through the ground state of the Lennard-Jones and
C clusters collected at the Cambridge Cluster Database.Comment: 6 pages, 7 figure
Some Further Results for the Stationary Points and Dynamics of Supercooled Liquids
We present some new theoretical and computational results for the stationary
points of bulk systems. First we demonstrate how the potential energy surface
can be partitioned into catchment basins associated with every stationary point
using a combination of Newton-Raphson and eigenvector-following techniques.
Numerical results are presented for a 256-atom supercell representation of a
binary Lennard-Jones system. We then derive analytical formulae for the number
of stationary points as a function of both system size and the Hessian index,
using a framework based upon weakly interacting subsystems. This analysis
reveals a simple relation between the total number of stationary points, the
number of local minima, and the number of transition states connected on
average to each minimum. Finally we calculate two measures of localisation for
the displacements corresponding to Hessian eigenvectors in samples of
stationary points obtained from the Newton-Raphson-based geometry optimisation
scheme. Systematic differences are found between the properties of eigenvectors
corresponding to positive and negative Hessian eigenvalues, and localised
character is most pronounced for stationary points with low values of the
Hessian index.Comment: 16 pages, 2 figure
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